OpenMS
CVMappings.h
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31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Andreas Bertsch $
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34 
35 #pragma once
36 
37 #include <OpenMS/OpenMSConfig.h>
39 #include <map>
40 #include <vector>
41 
42 namespace OpenMS
43 {
44  class CVMappingRule;
45  class CVReference;
46 
56  class OPENMS_DLLAPI CVMappings
57  {
58 public:
59 
62 
64  CVMappings(const CVMappings& rhs);
65 
67  virtual ~CVMappings();
68 
71 
76  void setMappingRules(const std::vector<CVMappingRule>& cv_mapping_rules);
77 
79  const std::vector<CVMappingRule>& getMappingRules() const;
80 
82  void addMappingRule(const CVMappingRule& cv_mapping_rule);
83 
85  void setCVReferences(const std::vector<CVReference>& cv_references);
86 
88  const std::vector<CVReference>& getCVReferences() const;
89 
91  void addCVReference(const CVReference& cv_reference);
93 
98  bool hasCVReference(const String& identifier);
99 
101  bool operator==(const CVMappings& rhs) const;
102 
104  bool operator!=(const CVMappings& rhs) const;
106 
107 protected:
108 
109  std::vector<CVMappingRule> mapping_rules_;
110 
111  std::map<String, CVReference> cv_references_;
112 
113  std::vector<CVReference> cv_references_vector_;
114  };
115 } // namespace OpenMS
116 
Representation of a CV Mapping rule used by CVMappings.
Definition: CVMappingRule.h:54
Representation of controlled vocabulary mapping rules (for PSI formats)
Definition: CVMappings.h:57
void addMappingRule(const CVMappingRule &cv_mapping_rule)
adds a mapping rule
virtual ~CVMappings()
Destructor.
bool hasCVReference(const String &identifier)
returns true if a CV reference is given
const std::vector< CVReference > & getCVReferences() const
returns the CV references
CVMappings()
Default constructor.
CVMappings & operator=(const CVMappings &rhs)
Assignment operator.
const std::vector< CVMappingRule > & getMappingRules() const
returns the mapping rules
bool operator==(const CVMappings &rhs) const
equality operator
std::vector< CVReference > cv_references_vector_
Definition: CVMappings.h:113
bool operator!=(const CVMappings &rhs) const
inequality operator
void setMappingRules(const std::vector< CVMappingRule > &cv_mapping_rules)
sets the mapping rules of the mapping file
void addCVReference(const CVReference &cv_reference)
adds a CV reference
void setCVReferences(const std::vector< CVReference > &cv_references)
sets the CV references
CVMappings(const CVMappings &rhs)
Copy constructor.
std::map< String, CVReference > cv_references_
Definition: CVMappings.h:111
std::vector< CVMappingRule > mapping_rules_
Definition: CVMappings.h:109
Controlled Vocabulary Reference.
Definition: CVReference.h:53
A more convenient string class.
Definition: String.h:60
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:48