OpenMS
CompNovoIonScoringCID.h
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31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Andreas Bertsch $
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34 
35 
36 #pragma once
37 
38 // OpenMS includes
46 
47 // stl includes
48 #include <vector>
49 #include <map>
50 
51 namespace OpenMS
52 {
60  class OPENMS_DLLAPI CompNovoIonScoringCID :
62  {
63 
64 public:
65 
68 
69 
75 
78 
82 
85 
89  void scoreSpectrum(std::map<double, IonScore> & CID_ion_scores, PeakSpectrum & CID_spec, double precursor_weight, Size charge);
91 
92 protected:
93 
94  void scoreWitnessSet_(Size charge, double precursor_weight, std::map<double, IonScore> & CID_nodes, const PeakSpectrum & CID_orig_spec) override;
95  };
96 
97 }
98 
run with CompNovoIonScoringBase
Definition: CompNovoIonScoringBase.h:56
IsotopeType
Definition: CompNovoIonScoringBase.h:61
run with CompNovoIonScoringCID
Definition: CompNovoIonScoringCID.h:62
void scoreWitnessSet_(Size charge, double precursor_weight, std::map< double, IonScore > &CID_nodes, const PeakSpectrum &CID_orig_spec) override
void scoreSpectrum(std::map< double, IonScore > &CID_ion_scores, PeakSpectrum &CID_spec, double precursor_weight, Size charge)
CompNovoIonScoringBase::IonScore IonScore
Definition: CompNovoIonScoringCID.h:67
CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID &source)
~CompNovoIonScoringCID() override
destructor
CompNovoIonScoringBase::IsotopeType IsotopeType
Definition: CompNovoIonScoringCID.h:66
CompNovoIonScoringCID()
default constructor
CompNovoIonScoringCID(const CompNovoIonScoringCID &source)
copy constructor
The representation of a 1D spectrum.
Definition: MSSpectrum.h:70
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:48
Definition: CompNovoIonScoringBase.h:68