OpenMS
KDTreeFeatureNode.h
Go to the documentation of this file.
1 // --------------------------------------------------------------------------
2 // OpenMS -- Open-Source Mass Spectrometry
3 // --------------------------------------------------------------------------
4 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
5 // ETH Zurich, and Freie Universitaet Berlin 2002-2023.
6 //
7 // This software is released under a three-clause BSD license:
8 // * Redistributions of source code must retain the above copyright
9 // notice, this list of conditions and the following disclaimer.
10 // * Redistributions in binary form must reproduce the above copyright
11 // notice, this list of conditions and the following disclaimer in the
12 // documentation and/or other materials provided with the distribution.
13 // * Neither the name of any author or any participating institution
14 // may be used to endorse or promote products derived from this software
15 // without specific prior written permission.
16 // For a full list of authors, refer to the file AUTHORS.
17 // --------------------------------------------------------------------------
18 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
19 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
20 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
21 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
22 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
23 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
24 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
25 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
26 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
27 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
28 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
29 //
30 // --------------------------------------------------------------------------
31 // $Maintainer: Johannes Veit $
32 // $Authors: Johannes Veit $
33 // --------------------------------------------------------------------------
34 
35 #pragma once
36 
37 #include <OpenMS/config.h>
38 
39 #include <OpenMS/CONCEPT/Types.h>
41 #include <OpenMS/CONCEPT/Macros.h>
42 
43 namespace OpenMS
44 {
45 
46 class KDTreeFeatureMaps;
47 
49 class OPENMS_DLLAPI KDTreeFeatureNode
50 {
51 
52 public:
53 
56 
59 
62 
64  virtual ~KDTreeFeatureNode();
65 
67  typedef double value_type;
68 
71 
73  Size getIndex() const;
74 
75 protected:
76 
79 
82 
83 private:
84 
87 
88 };
89 
90 }
91 
Stores a set of features, together with a 2D tree for fast search.
Definition: KDTreeFeatureMaps.h:50
A node of the kD-tree with pointer to corresponding data and index.
Definition: KDTreeFeatureNode.h:50
KDTreeFeatureNode(KDTreeFeatureMaps *data, Size idx)
Constructor.
Size idx_
Index of this feature.
Definition: KDTreeFeatureNode.h:81
Size getIndex() const
Return index of corresponding feature in data_.
KDTreeFeatureNode(const KDTreeFeatureNode &rhs)
Copy constructor - copy the pointer, use same data object.
KDTreeFeatureMaps * data_
Pointer to the actual data.
Definition: KDTreeFeatureNode.h:78
value_type operator[](Size i) const
Needed for 2D range queries using libkdtree++. [0] returns RT, [1] m/z.
double value_type
libkdtree++ needs this typedef
Definition: KDTreeFeatureNode.h:67
KDTreeFeatureNode()
Default constructor is not supposed to be called.
KDTreeFeatureNode & operator=(KDTreeFeatureNode const &rhs)
Assignment operator - copy the pointer, use same data object.
virtual ~KDTreeFeatureNode()
Destructor.
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:48