OpenMS
MSDataCachedConsumer.h
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34 
35 #pragma once
36 
38 
40 
42 
43 
44 namespace OpenMS
45 {
46 
54  class OPENMS_DLLAPI MSDataCachedConsumer :
57  {
60 
61  public:
62 
77  MSDataCachedConsumer(const String& filename, bool clearData=true);
78 
85 
91  void consumeSpectrum(SpectrumType & s) override;
92 
99 
100  void setExpectedSize(Size /* expectedSpectra */, Size /* expectedChromatograms */) override {;}
101 
102  void setExperimentalSettings(const ExperimentalSettings& /* exp */) override {;}
103 
104  protected:
105  std::ofstream ofs_;
109 
110  };
111 
112 } //end namespace OpenMS
113 
Description of the experimental settings.
Definition: ExperimentalSettings.h:62
The interface of a consumer of spectra and chromatograms.
Definition: IMSDataConsumer.h:70
An class that uses on-disk caching to read and write spectra and chromatograms.
Definition: CachedMzMLHandler.h:68
The representation of a chromatogram.
Definition: MSChromatogram.h:57
Transforming and cached writing consumer of MS data.
Definition: MSDataCachedConsumer.h:57
MSChromatogram ChromatogramType
Definition: MSDataCachedConsumer.h:59
std::ofstream ofs_
Definition: MSDataCachedConsumer.h:105
Size spectra_written_
Definition: MSDataCachedConsumer.h:107
MSSpectrum SpectrumType
Definition: MSDataCachedConsumer.h:58
void setExperimentalSettings(const ExperimentalSettings &) override
Set experimental settings (meta-data) of the data to be consumed.
Definition: MSDataCachedConsumer.h:102
void consumeChromatogram(ChromatogramType &c) override
Write a chromatogram to the output file.
void setExpectedSize(Size, Size) override
Set expected size of spectra and chromatograms to be consumed.
Definition: MSDataCachedConsumer.h:100
MSDataCachedConsumer(const String &filename, bool clearData=true)
Constructor.
~MSDataCachedConsumer() override
Destructor.
void consumeSpectrum(SpectrumType &s) override
Write a spectrum to the output file.
bool clearData_
Definition: MSDataCachedConsumer.h:106
Size chromatograms_written_
Definition: MSDataCachedConsumer.h:108
The representation of a 1D spectrum.
Definition: MSSpectrum.h:70
A more convenient string class.
Definition: String.h:60
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:127
const double c
Definition: Constants.h:214
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:48