OpenMS
ProteinIdentificationVisualizer.h
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31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Marc Sturm $
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34 
35 #pragma once
36 
37 // OpenMS_GUI config
38 #include <OpenMS/VISUAL/OpenMS_GUIConfig.h>
39 
40 //OpenMS
44 
45 namespace OpenMS
46 {
47  class MetaDataBrowser;
48 
54  class OPENMS_GUI_DLLAPI ProteinIdentificationVisualizer :
55  public BaseVisualizerGUI,
56  public BaseVisualizer<ProteinIdentification>
57  {
58  Q_OBJECT
59 
60 public:
62  ProteinIdentificationVisualizer(bool editable = false, QWidget * parent = 0, MetaDataBrowser * caller = nullptr);
63 
65  void load(ProteinIdentification & s, int tree_item_id);
66 
67 public slots:
68 
69  //Docu in base class
70  void store() override;
71 
72 protected slots:
73 
81  void updateTree_();
82 
84  void undo_();
85 
86 protected:
87 
91  int tree_id_;
92 
94 
101  QComboBox * higher_better_;
102 
110  QComboBox * mass_type_;
113 
116  };
117 }
A base class for all visualizer classes.
Definition: BaseVisualizerGUI.h:66
A base class for all visualizer classes.
Definition: BaseVisualizer.h:54
A meta data visualization widget.
Definition: MetaDataBrowser.h:106
Class that displays all meta information for ProteinIdentification objects.
Definition: ProteinIdentificationVisualizer.h:57
ProteinIdentificationVisualizer(bool editable=false, QWidget *parent=0, MetaDataBrowser *caller=nullptr)
Constructor.
QLineEdit * identifier_
Definition: ProteinIdentificationVisualizer.h:99
QLineEdit * db_version_
Definition: ProteinIdentificationVisualizer.h:104
QComboBox * mass_type_
Definition: ProteinIdentificationVisualizer.h:110
QLineEdit * identification_date_
Definition: ProteinIdentificationVisualizer.h:97
QLineEdit * engine_version_
Definition: ProteinIdentificationVisualizer.h:96
QLineEdit * enzyme_
Definition: ProteinIdentificationVisualizer.h:111
QComboBox * higher_better_
Definition: ProteinIdentificationVisualizer.h:101
QLineEdit * charges_
Definition: ProteinIdentificationVisualizer.h:106
QLineEdit * score_type_
Definition: ProteinIdentificationVisualizer.h:100
QLineEdit * identification_threshold_
Definition: ProteinIdentificationVisualizer.h:98
QLineEdit * engine_
Definition: ProteinIdentificationVisualizer.h:95
QLineEdit * missed_cleavages_
Definition: ProteinIdentificationVisualizer.h:107
int tree_id_
The id of the item in the tree.
Definition: ProteinIdentificationVisualizer.h:91
void undo_()
Undo the changes made in the GUI.
void updateTree_()
Updates the tree by calling MetaDataBrowser::updateProteinHits()
QLineEdit * peak_tolerance_
Definition: ProteinIdentificationVisualizer.h:108
QLineEdit * filter_threshold_
Threshold for filtering by score.
Definition: ProteinIdentificationVisualizer.h:115
MetaDataBrowser * pidv_caller_
Pointer to MetaDataBrowser.
Definition: ProteinIdentificationVisualizer.h:89
QLineEdit * db_
Definition: ProteinIdentificationVisualizer.h:103
QLineEdit * taxonomy_
Definition: ProteinIdentificationVisualizer.h:105
QLineEdit * precursor_tolerance_
Definition: ProteinIdentificationVisualizer.h:109
void load(ProteinIdentification &s, int tree_item_id)
Loads the meta data from the object to the viewer. Gets the id of the item in the tree as parameter.
Representation of a protein identification run.
Definition: ProteinIdentification.h:76
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:48