OpenMS
RawTandemMSSignalSimulation.h
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31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Stephan Aiche, Chris Bielow, Sandro Andreotti $
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34 
35 #pragma once
36 
39 
40 namespace OpenMS
41 {
42 
53  class OPENMS_DLLAPI RawTandemMSSignalSimulation :
54  public DefaultParamHandler
55  {
56 public:
57 
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83 
84 protected:
85 
87  void initParam_();
88 
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92 
95  };
96 
97 }
98 
A base class for all classes handling default parameters.
Definition: DefaultParamHandler.h:92
A container for features.
Definition: FeatureMap.h:106
In-Memory representation of a mass spectrometry run.
Definition: MSExperiment.h:72
Simulates tandem MS signals for a given set of peptides.
Definition: RawTandemMSSignalSimulation.h:55
RawTandemMSSignalSimulation & operator=(const RawTandemMSSignalSimulation &source)
void initParam_()
initialize param_ class
void generateRawTandemSignals(const SimTypes::FeatureMapSim &, SimTypes::MSSimExperiment &, SimTypes::MSSimExperiment &)
~RawTandemMSSignalSimulation() override
Destructor.
RawTandemMSSignalSimulation(const RawTandemMSSignalSimulation &source)
Copy constructor.
void generateMSESpectra_(const SimTypes::FeatureMapSim &features, const SimTypes::MSSimExperiment &experiment, SimTypes::MSSimExperiment &ms2)
RawTandemMSSignalSimulation(SimTypes::MutableSimRandomNumberGeneratorPtr rng)
Constructor taking a random generator.
SimTypes::MutableSimRandomNumberGeneratorPtr rnd_gen_
Random number generator.
Definition: RawTandemMSSignalSimulation.h:94
void generatePrecursorSpectra_(const SimTypes::FeatureMapSim &features, const SimTypes::MSSimExperiment &experiment, SimTypes::MSSimExperiment &ms2)
RawTandemMSSignalSimulation()
Default constructor (hidden)
boost::shared_ptr< SimRandomNumberGenerator > MutableSimRandomNumberGeneratorPtr
Definition: SimTypes.h:174
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:48