• M. Sturm and O. Kohlbacher, “TOPPView: an open-source viewer for mass spectrometry data,” Journal of proteome research, vol. 8, iss. 7, pp. 3760-3763, 2009.
    [Bibtex]
    @article{sturm2009toppview,
    title={TOPPView: an open-source viewer for mass spectrometry data},
    author={Sturm, Marc and Kohlbacher, Oliver},
    journal={Journal of proteome research},
    volume={8},
    number={7},
    pages={3760--3763},
    year={2009},
    publisher={ACS Publications}
    }
  • C. Bielow, S. Aiche, S. Andreotti, A. Bertsch, C. Gröpl, R. Hussong, N. Pfeifer, M. Sturm, A. Zerck, A. Hildebrandt, and others, “OpenMS—An Open Source Framework for Mass Spec-trometry Data,” German Conference on Bioinformatics 2009, p. 154.
    [Bibtex]
    @article{bielow2009openms,
    title={OpenMS—An Open Source Framework for Mass Spec-trometry Data},
    author={Bielow, Chris and Aiche, Stephan and Andreotti, Sandro and Bertsch, Andreas and Gr{\"o}pl, Clemens and Hussong, Rene and Pfeifer, Nico and Sturm, Marc and Zerck, Alexandra and Hildebrandt, Andreas and others},
    journal={German Conference on Bioinformatics 2009},
    pages={154}
    }
  • A. Bertsch, A. Leinenbach, A. Pervukhin, M. Lubeck, R. Hartmer, C. Baessmann, Y. A. Elnakady, R. Müller, S. Böcker, C. G. Huber, and others, “De novo peptide sequencing by tandem MS using complementary CID and electron transfer dissociation,” Electrophoresis, vol. 30, iss. 21, pp. 3736-3747, 2009.
    [Bibtex]
    @article{bertsch2009novo,
    title={De novo peptide sequencing by tandem MS using complementary CID and electron transfer dissociation},
    author={Bertsch, Andreas and Leinenbach, Andreas and Pervukhin, Anton and Lubeck, Markus and Hartmer, Ralf and Baessmann, Carsten and Elnakady, Yasser Abbas and M{\"u}ller, Rolf and B{\"o}cker, Sebastian and Huber, Christian G and others},
    journal={Electrophoresis},
    volume={30},
    number={21},
    pages={3736--3747},
    year={2009},
    publisher={Wiley Online Library}
    }
  • N. Pfeifer, A. Leinenbach, C. G. Huber, and O. Kohlbacher, “Improving peptide identification in proteome analysis by a two-dimensional retention time filtering approach,” Journal of proteome research, vol. 8, iss. 8, pp. 4109-4115, 2009.
    [Bibtex]
    @article{pfeifer2009improving,
    title={Improving peptide identification in proteome analysis by a two-dimensional retention time filtering approach},
    author={Pfeifer, Nico and Leinenbach, Andreas and Huber, Christian G and Kohlbacher, Oliver},
    journal={Journal of proteome research},
    volume={8},
    number={8},
    pages={4109--4115},
    year={2009},
    publisher={ACS Publications}
    }
  • L. Nilse, M. Sturm, D. Trudgian, M. Salek, P. F. Sims, K. M. Carroll, and S. J. Hubbard, “SILACAnalyzer-a tool for differential quantitation of stable isotope derived data,” in Computational Intelligence Methods for Bioinformatics and Biostatistics, Springer Berlin Heidelberg, 2009, pp. 45-55.
    [Bibtex]
    @incollection{nilse2009silacanalyzer,
    title={SILACAnalyzer-a tool for differential quantitation of stable isotope derived data},
    author={Nilse, Lars and Sturm, Marc and Trudgian, David and Salek, Mogjiborahman and Sims, Paul FG and Carroll, Kathleen M and Hubbard, Simon J},
    booktitle={Computational Intelligence Methods for Bioinformatics and Biostatistics},
    pages={45--55},
    year={2009},
    publisher={Springer Berlin Heidelberg}
    }
  • O. Kohlbacher and K. Reinert, “OpenMS and TOPP: Open source software for lc-ms data analysis,” Proteome Bioinformatics, vol. 604, iss. 2, 2009.
    [Bibtex]
    @article{kohlbacher2009openms,
    title={OpenMS and TOPP: Open source software for lc-ms data analysis},
    author={Kohlbacher, O and Reinert, K},
    journal={Proteome Bioinformatics},
    volume={604},
    number={2},
    year={2009}
    }