Featured tools
- Feature level label-free quantification algorithm for top-down proteomics (FLASHDeconvQ)
- SRM Quantitation and QC (SmartPeak 2)
- Protein-nucleic acid cross-linking (OpenNuXL)
- Efficient Bayesian protein inference (EPIFANY)
- Ultra-fast MS1/MS2 deconvolution for top-down proteomics: FLASHDeconv 2.0 beta+, finally with a GUI!
- Nucleic Acid Search Engine (NASE)
- Protein-Protein Cross-Linking (OpenPepXL)
- RNA-Protein Cross-Linking (RNPxl)
- Stable Isotope Probing (MetaProSIP)
Featured workflows
OpenMS is a flexible codebase that can be tailored to many different applications ranging from the standard label free analysis to top down, metabolomics, crosslinking or DIA.
Choose an application of OpenMS that you are interested in. The pages will provide explanations on how OpenMS can be used to solve your problems and link to workflows that allow you to apply the tools to your data.
If you cannot find your application in the menu on the left, more OpenMS tools can be found in the TOPP documentation.