Featured tools
- Intelligent data acquisition for top-down proteomics (FLASHIda)
- Feature level label-free quantification algorithm for top-down proteomics (FLASHDeconvQ)
- SRM Quantitation and QC (SmartPeak 2)
- Protein-nucleic acid cross-linking (OpenNuXL)
- Efficient Bayesian protein inference (EPIFANY)
- Ultra-fast MS1/MS2 deconvolution for top-down proteomics: FLASHDeconv 2.0 beta+, finally with a GUI!
- Nucleic Acid Search Engine (NASE)
- Protein-Protein Cross-Linking (OpenPepXL)
- RNA-Protein Cross-Linking (RNPxl)
- Stable Isotope Probing (MetaProSIP)
Featured workflows
Based on OpenMS, a full SRM quantitation and quality control suite was developed by DTU BioSustain. It provides a standalone GUI for easy, fast, and scalable analysis of high-throughput metabolomics SRM experiments. It also added a set of state-of-the-art peak integration and peak alignment algorithms to the library.