COMMANDLINE QUICK START

See our installer instructions


Install via bioconda:

conda install -c bioconda openms-thirdparty

 

Available conda packages:

openms-thirdparty   –  OpenMS thirdparty tools eg. Percolator, XTandem

openms              –  OpenMS library + tools

libopenms           –  only the OpenMS library (e.g. for C++ development)

pyopenms – OpenMS library + python wrappers for use in python

Fork us on GitHub:

git clone https://github.com/OpenMS/OpenMS.git

 

OR DO YOU WANT TO

BUILD WORKFLOWS WITH OPENMS?

OpenMS tools integrated into workflow engines Knime, Galaxy, WS-Pgrade, and TOPPAS

USE OPENMS COMMAND LINE TOOLS AND VISUALIZATIONS?

Pre-built analysis tools and powerful 2D and 3D visualization

DEVELOP YOUR OWN OPENMS TOOLS?

Comprehensive and documented C++ codebase and Python bindings

USE OPENMS IN CD/PD?

Proven OpenMS workflows integrated into Thermo Fisher Proteome Discoverer and Compound Discoverer

DO YOU HAVE ANY SPECIFIC QUESTION OR ISSUE?

Contact us directly at support@open-ms.sourceforge.net